Cluster: BrooksB_2017_SRR5405894_bin.8_CGC29
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: BrooksB_2017_SRR5405894_bin.8
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_2674 | BrooksB_2017_SRR5405894_bin.8_k119_2674_57 | 52688 | 53926 | - | GT4 |
| CAZyme | BrooksB_2017_SRR5405894_bin.8_k119_2674 | BrooksB_2017_SRR5405894_bin.8_k119_2674_58 | 53942 | 54985 | - | GT4 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_2674 | BrooksB_2017_SRR5405894_bin.8_k119_2674_59 | 55253 | 56980 | - | 8.A.7.1.1 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_2674 | BrooksB_2017_SRR5405894_bin.8_k119_2674_60 | 56980 | 57246 | - | 8.A.8.1.1 |
| TC | BrooksB_2017_SRR5405894_bin.8_k119_2674 | BrooksB_2017_SRR5405894_bin.8_k119_2674_61 | 57687 | 59906 | + | 3.A.9.1.2 |
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2674_57
Type: CAZyme
Location: 52688 - 53926 (-)
Type: CAZyme
Location: 52688 - 53926 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2674_58
Type: CAZyme
Location: 53942 - 54985 (-)
Type: CAZyme
Location: 53942 - 54985 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2674_59
Type: TC
Location: 55253 - 56980 (-)
Type: TC
Location: 55253 - 56980 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2674_60
Type: TC
Location: 56980 - 57246 (-)
Type: TC
Location: 56980 - 57246 (-)
Gene ID: BrooksB_2017_SRR5405894_bin.8_k119_2674_61
Type: TC
Location: 57687 - 59906 (+)
Type: TC
Location: 57687 - 59906 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.