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Cluster: BrooksB_2017_SRR5405742_bin.5_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC BrooksB_2017_SRR5405742_bin.5_k141_2708 BrooksB_2017_SRR5405742_bin.5_k141_2708_26 26562 27053 - 9.B.105.1.1
pfam BrooksB_2017_SRR5405742_bin.5_k141_2708 BrooksB_2017_SRR5405742_bin.5_k141_2708_27 27170 28540 - Hexapep | Hexapep | NTP_transferase | IspD | NTP_transf_3 | Hexapep_2 | Hexapep_2
peptidase BrooksB_2017_SRR5405742_bin.5_k141_2708 BrooksB_2017_SRR5405742_bin.5_k141_2708_28 28800 30437 + C26.964
CAZyme BrooksB_2017_SRR5405742_bin.5_k141_2708 BrooksB_2017_SRR5405742_bin.5_k141_2708_29 30560 31495 + GT2
Gene ID: BrooksB_2017_SRR5405742_bin.5_k141_2708_26
Type: TC
Location: 26562 - 27053 (-)
Gene ID: BrooksB_2017_SRR5405742_bin.5_k141_2708_27
Type: pfam
Location: 27170 - 28540 (-)
Gene ID: BrooksB_2017_SRR5405742_bin.5_k141_2708_28
Type: peptidase
Location: 28800 - 30437 (+)
Gene ID: BrooksB_2017_SRR5405742_bin.5_k141_2708_29
Type: CAZyme
Location: 30560 - 31495 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
BrooksB_2017_SRR5405742_bin.5_k141_2708_26 vegan > omnivore 1.13004 0.00732
BrooksB_2017_SRR5405742_bin.5_k141_2708_26 vegetarian > omnivore 1.09578 0.00460

🧭 Explore Read Mapping of CGC

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