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Cluster: BrooksB_2017_SRR5405742_bin.5_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC BrooksB_2017_SRR5405742_bin.5_k141_1741 BrooksB_2017_SRR5405742_bin.5_k141_1741_343 358129 360384 - 1.B.14.1.3
TC BrooksB_2017_SRR5405742_bin.5_k141_1741 BrooksB_2017_SRR5405742_bin.5_k141_1741_344 360636 361343 + 2.A.88.8.6
TC BrooksB_2017_SRR5405742_bin.5_k141_1741 BrooksB_2017_SRR5405742_bin.5_k141_1741_345 361358 362674 + 2.A.1.15.11
peptidase BrooksB_2017_SRR5405742_bin.5_k141_1741 BrooksB_2017_SRR5405742_bin.5_k141_1741_346 362895 363722 + C44.UPW
STP BrooksB_2017_SRR5405742_bin.5_k141_1741 BrooksB_2017_SRR5405742_bin.5_k141_1741_347 363791 365161 - Pyr_redox_2
CAZyme BrooksB_2017_SRR5405742_bin.5_k141_1741 BrooksB_2017_SRR5405742_bin.5_k141_1741_348 365381 366508 + GT2
CAZyme BrooksB_2017_SRR5405742_bin.5_k141_1741 BrooksB_2017_SRR5405742_bin.5_k141_1741_349 366541 367515 + GT2
CAZyme BrooksB_2017_SRR5405742_bin.5_k141_1741 BrooksB_2017_SRR5405742_bin.5_k141_1741_350 367539 368375 - GT8
TC BrooksB_2017_SRR5405742_bin.5_k141_1741 BrooksB_2017_SRR5405742_bin.5_k141_1741_351 368531 370705 - 1.B.40.2.2
Gene ID: BrooksB_2017_SRR5405742_bin.5_k141_1741_343
Type: TC
Location: 358129 - 360384 (-)
Gene ID: BrooksB_2017_SRR5405742_bin.5_k141_1741_344
Type: TC
Location: 360636 - 361343 (+)
Gene ID: BrooksB_2017_SRR5405742_bin.5_k141_1741_345
Type: TC
Location: 361358 - 362674 (+)
Gene ID: BrooksB_2017_SRR5405742_bin.5_k141_1741_346
Type: peptidase
Location: 362895 - 363722 (+)
Gene ID: BrooksB_2017_SRR5405742_bin.5_k141_1741_347
Type: STP
Location: 363791 - 365161 (-)
Gene ID: BrooksB_2017_SRR5405742_bin.5_k141_1741_348
Type: CAZyme
Location: 365381 - 366508 (+)
Gene ID: BrooksB_2017_SRR5405742_bin.5_k141_1741_349
Type: CAZyme
Location: 366541 - 367515 (+)
Gene ID: BrooksB_2017_SRR5405742_bin.5_k141_1741_350
Type: CAZyme
Location: 367539 - 368375 (-)
Gene ID: BrooksB_2017_SRR5405742_bin.5_k141_1741_351
Type: TC
Location: 368531 - 370705 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
BrooksB_2017_SRR5405742_bin.5_k141_1741_346 vegan > omnivore 1.49376 0.00732
BrooksB_2017_SRR5405742_bin.5_k141_1741_347 vegan > omnivore 1.17450 0.00732

🧭 Explore Read Mapping of CGC

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