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Cluster: BrooksB_2017_SRR5405742_bin.5_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC BrooksB_2017_SRR5405742_bin.5_k141_3688 BrooksB_2017_SRR5405742_bin.5_k141_3688_380 394976 396640 - 4.A.1.1.11
pfam BrooksB_2017_SRR5405742_bin.5_k141_3688 BrooksB_2017_SRR5405742_bin.5_k141_3688_381 396651 397442 - Exo_endo_phos
CAZyme BrooksB_2017_SRR5405742_bin.5_k141_3688 BrooksB_2017_SRR5405742_bin.5_k141_3688_382 397452 401225 - GH77 | GT35
TF BrooksB_2017_SRR5405742_bin.5_k141_3688 BrooksB_2017_SRR5405742_bin.5_k141_3688_383 401420 402133 + GntR
TC BrooksB_2017_SRR5405742_bin.5_k141_3688 BrooksB_2017_SRR5405742_bin.5_k141_3688_384 402203 403156 - 2.A.16.1.2
Gene ID: BrooksB_2017_SRR5405742_bin.5_k141_3688_380
Type: TC
Location: 394976 - 396640 (-)
Gene ID: BrooksB_2017_SRR5405742_bin.5_k141_3688_381
Type: pfam
Location: 396651 - 397442 (-)
Gene ID: BrooksB_2017_SRR5405742_bin.5_k141_3688_382
Type: CAZyme
Location: 397452 - 401225 (-)
Gene ID: BrooksB_2017_SRR5405742_bin.5_k141_3688_383
Type: TF
Location: 401420 - 402133 (+)
Gene ID: BrooksB_2017_SRR5405742_bin.5_k141_3688_384
Type: TC
Location: 402203 - 403156 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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