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Cluster: BrooksB_2017_SRR5405686_bin.8_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme BrooksB_2017_SRR5405686_bin.8_k141_2897 BrooksB_2017_SRR5405686_bin.8_k141_2897_7 6225 6866 + GH23
TC BrooksB_2017_SRR5405686_bin.8_k141_2897 BrooksB_2017_SRR5405686_bin.8_k141_2897_8 7049 8338 + 3.D.6.1.2
TC BrooksB_2017_SRR5405686_bin.8_k141_2897 BrooksB_2017_SRR5405686_bin.8_k141_2897_9 8342 9313 + 3.D.6.1.2
pfam BrooksB_2017_SRR5405686_bin.8_k141_2897 BrooksB_2017_SRR5405686_bin.8_k141_2897_10 9310 9882 + FMN_bind
TC BrooksB_2017_SRR5405686_bin.8_k141_2897 BrooksB_2017_SRR5405686_bin.8_k141_2897_11 9893 10522 + 3.D.6.1.3
TC BrooksB_2017_SRR5405686_bin.8_k141_2897 BrooksB_2017_SRR5405686_bin.8_k141_2897_12 10522 11103 + 3.D.6.1.2
TC BrooksB_2017_SRR5405686_bin.8_k141_2897 BrooksB_2017_SRR5405686_bin.8_k141_2897_13 11114 11965 + 3.D.6.1.3
Gene ID: BrooksB_2017_SRR5405686_bin.8_k141_2897_7
Type: CAZyme
Location: 6225 - 6866 (+)
Gene ID: BrooksB_2017_SRR5405686_bin.8_k141_2897_8
Type: TC
Location: 7049 - 8338 (+)
Gene ID: BrooksB_2017_SRR5405686_bin.8_k141_2897_9
Type: TC
Location: 8342 - 9313 (+)
Gene ID: BrooksB_2017_SRR5405686_bin.8_k141_2897_10
Type: pfam
Location: 9310 - 9882 (+)
Gene ID: BrooksB_2017_SRR5405686_bin.8_k141_2897_11
Type: TC
Location: 9893 - 10522 (+)
Gene ID: BrooksB_2017_SRR5405686_bin.8_k141_2897_12
Type: TC
Location: 10522 - 11103 (+)
Gene ID: BrooksB_2017_SRR5405686_bin.8_k141_2897_13
Type: TC
Location: 11114 - 11965 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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