Cluster: BrooksB_2017_SRR5405686_bin.8_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: BrooksB_2017_SRR5405686_bin.8
- CGC Family ID: CGCFAM_00013
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | BrooksB_2017_SRR5405686_bin.8_k141_1774 | BrooksB_2017_SRR5405686_bin.8_k141_1774_31 | 27961 | 29073 | - | GT28 |
| TC | BrooksB_2017_SRR5405686_bin.8_k141_1774 | BrooksB_2017_SRR5405686_bin.8_k141_1774_32 | 29070 | 30179 | - | 2.A.103.1.3 |
| pfam | BrooksB_2017_SRR5405686_bin.8_k141_1774 | BrooksB_2017_SRR5405686_bin.8_k141_1774_33 | 30184 | 31509 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | BrooksB_2017_SRR5405686_bin.8_k141_1774 | BrooksB_2017_SRR5405686_bin.8_k141_1774_34 | 31517 | 32479 | - | 9.B.146.1.3 |
Gene ID: BrooksB_2017_SRR5405686_bin.8_k141_1774_31
Type: CAZyme
Location: 27961 - 29073 (-)
Type: CAZyme
Location: 27961 - 29073 (-)
Gene ID: BrooksB_2017_SRR5405686_bin.8_k141_1774_32
Type: TC
Location: 29070 - 30179 (-)
Type: TC
Location: 29070 - 30179 (-)
Gene ID: BrooksB_2017_SRR5405686_bin.8_k141_1774_33
Type: pfam
Location: 30184 - 31509 (-)
Type: pfam
Location: 30184 - 31509 (-)
Gene ID: BrooksB_2017_SRR5405686_bin.8_k141_1774_34
Type: TC
Location: 31517 - 32479 (-)
Type: TC
Location: 31517 - 32479 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Finegoldia
Species
Finegoldia magna_I
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.