dbCAN Logo

Cluster: BrooksB_2017_SRR5405686_bin.8_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC BrooksB_2017_SRR5405686_bin.8_k141_1421 BrooksB_2017_SRR5405686_bin.8_k141_1421_35 37740 39206 + 2.A.114.1.2
TF BrooksB_2017_SRR5405686_bin.8_k141_1421 BrooksB_2017_SRR5405686_bin.8_k141_1421_36 39328 39975 + 0045030
STP BrooksB_2017_SRR5405686_bin.8_k141_1421 BrooksB_2017_SRR5405686_bin.8_k141_1421_37 40075 40620 + Hemerythrin
CAZyme BrooksB_2017_SRR5405686_bin.8_k141_1421 BrooksB_2017_SRR5405686_bin.8_k141_1421_38 40733 41887 + GT4
pfam BrooksB_2017_SRR5405686_bin.8_k141_1421 BrooksB_2017_SRR5405686_bin.8_k141_1421_39 41868 42491 + VTT_dom
CAZyme BrooksB_2017_SRR5405686_bin.8_k141_1421 BrooksB_2017_SRR5405686_bin.8_k141_1421_40 42498 43496 + GT4
pfam BrooksB_2017_SRR5405686_bin.8_k141_1421 BrooksB_2017_SRR5405686_bin.8_k141_1421_41 43624 43944 + SpoVG
pfam BrooksB_2017_SRR5405686_bin.8_k141_1421 BrooksB_2017_SRR5405686_bin.8_k141_1421_42 44069 45079 + AsnA
TC BrooksB_2017_SRR5405686_bin.8_k141_1421 BrooksB_2017_SRR5405686_bin.8_k141_1421_43 45186 46520 + 2.A.38.4.3
TC BrooksB_2017_SRR5405686_bin.8_k141_1421 BrooksB_2017_SRR5405686_bin.8_k141_1421_44 46530 47207 + 2.A.38.4.3
Gene ID: BrooksB_2017_SRR5405686_bin.8_k141_1421_35
Type: TC
Location: 37740 - 39206 (+)
Gene ID: BrooksB_2017_SRR5405686_bin.8_k141_1421_36
Type: TF
Location: 39328 - 39975 (+)
Gene ID: BrooksB_2017_SRR5405686_bin.8_k141_1421_37
Type: STP
Location: 40075 - 40620 (+)
Gene ID: BrooksB_2017_SRR5405686_bin.8_k141_1421_38
Type: CAZyme
Location: 40733 - 41887 (+)
Gene ID: BrooksB_2017_SRR5405686_bin.8_k141_1421_39
Type: pfam
Location: 41868 - 42491 (+)
Gene ID: BrooksB_2017_SRR5405686_bin.8_k141_1421_40
Type: CAZyme
Location: 42498 - 43496 (+)
Gene ID: BrooksB_2017_SRR5405686_bin.8_k141_1421_41
Type: pfam
Location: 43624 - 43944 (+)
Gene ID: BrooksB_2017_SRR5405686_bin.8_k141_1421_42
Type: pfam
Location: 44069 - 45079 (+)
Gene ID: BrooksB_2017_SRR5405686_bin.8_k141_1421_43
Type: TC
Location: 45186 - 46520 (+)
Gene ID: BrooksB_2017_SRR5405686_bin.8_k141_1421_44
Type: TC
Location: 46530 - 47207 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List