dbCAN HGM

Cluster: BrooksB_2017_SRR5405686_bin.8_CGC10

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	BrooksB_2017_SRR5405686_bin.8_k141_3714	BrooksB_2017_SRR5405686_bin.8_k141_3714_29	27778	30120	-	3.A.3.5.19
pfam	BrooksB_2017_SRR5405686_bin.8_k141_3714	BrooksB_2017_SRR5405686_bin.8_k141_3714_30	30236	31684	+	NAPRTase \| NAPRTase_N \| NAPRTase_C
STP	BrooksB_2017_SRR5405686_bin.8_k141_3714	BrooksB_2017_SRR5405686_bin.8_k141_3714_31	31767	32285	-	Pribosyltran
TC	BrooksB_2017_SRR5405686_bin.8_k141_3714	BrooksB_2017_SRR5405686_bin.8_k141_3714_32	32469	33713	+	9.A.40.2.4
pfam	BrooksB_2017_SRR5405686_bin.8_k141_3714	BrooksB_2017_SRR5405686_bin.8_k141_3714_33	33970	34578	-	RNase_H \| Cauli_VI \| RVT_3
CAZyme	BrooksB_2017_SRR5405686_bin.8_k141_3714	BrooksB_2017_SRR5405686_bin.8_k141_3714_34	34571	36016	-	GH13_5

Gene ID: BrooksB_2017_SRR5405686_bin.8_k141_3714_29
Type: TC
Location: 27778 - 30120 (-)

Gene ID: BrooksB_2017_SRR5405686_bin.8_k141_3714_30
Type: pfam
Location: 30236 - 31684 (+)

Gene ID: BrooksB_2017_SRR5405686_bin.8_k141_3714_31
Type: STP
Location: 31767 - 32285 (-)

Gene ID: BrooksB_2017_SRR5405686_bin.8_k141_3714_32
Type: TC
Location: 32469 - 33713 (+)

Gene ID: BrooksB_2017_SRR5405686_bin.8_k141_3714_33
Type: pfam
Location: 33970 - 34578 (-)

Gene ID: BrooksB_2017_SRR5405686_bin.8_k141_3714_34
Type: CAZyme
Location: 34571 - 36016 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.