Cluster: BrooksB_2017_SRR5405658_bin.3_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: BrooksB_2017_SRR5405658_bin.3
- CGC Family ID: CGCFAM_02700
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BrooksB_2017_SRR5405658_bin.3_k141_10606 | BrooksB_2017_SRR5405658_bin.3_k141_10606_70 | 81586 | 82995 | + | 2.A.66.1.22 |
| peptidase | BrooksB_2017_SRR5405658_bin.3_k141_10606 | BrooksB_2017_SRR5405658_bin.3_k141_10606_71 | 83019 | 83537 | + | M95.UPW |
| NULL(UNKNOWN) | BrooksB_2017_SRR5405658_bin.3_k141_10606 | BrooksB_2017_SRR5405658_bin.3_k141_10606_72 | 84194 | 85759 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | BrooksB_2017_SRR5405658_bin.3_k141_10606 | BrooksB_2017_SRR5405658_bin.3_k141_10606_73 | 86061 | 87080 | - | 1.A.35.3.2 |
| pfam | BrooksB_2017_SRR5405658_bin.3_k141_10606 | BrooksB_2017_SRR5405658_bin.3_k141_10606_74 | 87322 | 87510 | + | Fer4_13 | Fer4_15 |
| STP | BrooksB_2017_SRR5405658_bin.3_k141_10606 | BrooksB_2017_SRR5405658_bin.3_k141_10606_75 | 87573 | 88067 | - | HD |
| CAZyme | BrooksB_2017_SRR5405658_bin.3_k141_10606 | BrooksB_2017_SRR5405658_bin.3_k141_10606_76 | 88153 | 89280 | - | GT2 |
Gene ID: BrooksB_2017_SRR5405658_bin.3_k141_10606_70
Type: TC
Location: 81586 - 82995 (+)
Type: TC
Location: 81586 - 82995 (+)
Gene ID: BrooksB_2017_SRR5405658_bin.3_k141_10606_71
Type: peptidase
Location: 83019 - 83537 (+)
Type: peptidase
Location: 83019 - 83537 (+)
Gene ID: BrooksB_2017_SRR5405658_bin.3_k141_10606_72
Type:
Location: 84194 - 85759 (+)
Type:
Location: 84194 - 85759 (+)
Gene ID: BrooksB_2017_SRR5405658_bin.3_k141_10606_73
Type: TC
Location: 86061 - 87080 (-)
Type: TC
Location: 86061 - 87080 (-)
Gene ID: BrooksB_2017_SRR5405658_bin.3_k141_10606_74
Type: pfam
Location: 87322 - 87510 (+)
Type: pfam
Location: 87322 - 87510 (+)
Gene ID: BrooksB_2017_SRR5405658_bin.3_k141_10606_75
Type: STP
Location: 87573 - 88067 (-)
Type: STP
Location: 87573 - 88067 (-)
Gene ID: BrooksB_2017_SRR5405658_bin.3_k141_10606_76
Type: CAZyme
Location: 88153 - 89280 (-)
Type: CAZyme
Location: 88153 - 89280 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Clostridium_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.