Cluster: BrooksB_2017_SRR5405658_bin.3_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: BrooksB_2017_SRR5405658_bin.3
- CGC Family ID: CGCFAM_00696
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | BrooksB_2017_SRR5405658_bin.3_k141_7215 | BrooksB_2017_SRR5405658_bin.3_k141_7215_136 | 140697 | 141599 | + | GH25 |
| pfam | BrooksB_2017_SRR5405658_bin.3_k141_7215 | BrooksB_2017_SRR5405658_bin.3_k141_7215_137 | 141620 | 142075 | + | Phage_holin_4_1 |
| NULL(UNKNOWN) | BrooksB_2017_SRR5405658_bin.3_k141_7215 | BrooksB_2017_SRR5405658_bin.3_k141_7215_138 | 142126 | 142344 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | BrooksB_2017_SRR5405658_bin.3_k141_7215 | BrooksB_2017_SRR5405658_bin.3_k141_7215_139 | 142559 | 143680 | - | 9.A.5.3.1 |
Gene ID: BrooksB_2017_SRR5405658_bin.3_k141_7215_136
Type: CAZyme
Location: 140697 - 141599 (+)
Type: CAZyme
Location: 140697 - 141599 (+)
Gene ID: BrooksB_2017_SRR5405658_bin.3_k141_7215_137
Type: pfam
Location: 141620 - 142075 (+)
Type: pfam
Location: 141620 - 142075 (+)
Gene ID: BrooksB_2017_SRR5405658_bin.3_k141_7215_138
Type:
Location: 142126 - 142344 (-)
Type:
Location: 142126 - 142344 (-)
Gene ID: BrooksB_2017_SRR5405658_bin.3_k141_7215_139
Type: TC
Location: 142559 - 143680 (-)
Type: TC
Location: 142559 - 143680 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Clostridium_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.