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Cluster: BrooksB_2017_SRR5405658_bin.3_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC BrooksB_2017_SRR5405658_bin.3_k141_7215 BrooksB_2017_SRR5405658_bin.3_k141_7215_101 103957 105312 + 3.A.1.1.45
TC BrooksB_2017_SRR5405658_bin.3_k141_7215 BrooksB_2017_SRR5405658_bin.3_k141_7215_102 105460 106302 + 3.A.1.1.45
TC BrooksB_2017_SRR5405658_bin.3_k141_7215 BrooksB_2017_SRR5405658_bin.3_k141_7215_103 106302 107135 + 3.A.1.1.45
TF BrooksB_2017_SRR5405658_bin.3_k141_7215 BrooksB_2017_SRR5405658_bin.3_k141_7215_104 107171 108196 + LacI
CAZyme BrooksB_2017_SRR5405658_bin.3_k141_7215 BrooksB_2017_SRR5405658_bin.3_k141_7215_105 108198 109706 + GH77
CAZyme BrooksB_2017_SRR5405658_bin.3_k141_7215 BrooksB_2017_SRR5405658_bin.3_k141_7215_106 109804 112131 + GT35
Gene ID: BrooksB_2017_SRR5405658_bin.3_k141_7215_101
Type: TC
Location: 103957 - 105312 (+)
Gene ID: BrooksB_2017_SRR5405658_bin.3_k141_7215_102
Type: TC
Location: 105460 - 106302 (+)
Gene ID: BrooksB_2017_SRR5405658_bin.3_k141_7215_103
Type: TC
Location: 106302 - 107135 (+)
Gene ID: BrooksB_2017_SRR5405658_bin.3_k141_7215_104
Type: TF
Location: 107171 - 108196 (+)
Gene ID: BrooksB_2017_SRR5405658_bin.3_k141_7215_105
Type: CAZyme
Location: 108198 - 109706 (+)
Gene ID: BrooksB_2017_SRR5405658_bin.3_k141_7215_106
Type: CAZyme
Location: 109804 - 112131 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Acutalibacteraceae
→
Genus
Clostridium_E
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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