Cluster: Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_CGC21
🧬 Cluster Details
- Gene Count: 20
- CAZyme Count: 3
- Substrate:
- Genome ID: Baumann-DudenhoefferAM_2018_SRR7217651_bin.6
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057 | Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057_3 | 1420 | 2718 | - | GH3 |
| pfam | Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057 | Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057_4 | 2812 | 6525 | - | RNA_pol_Rpb1_2 | RNA_pol_Rpb1_3 | RNA_pol_Rpb1_1 | RNA_pol_Rpb1_5 | RNA_pol_Rpb1_4 |
| pfam | Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057 | Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057_5 | 6541 | 10383 | - | RNA_pol_Rpb2_6 | RNA_pol_Rpb2_7 | RNA_pol_Rpb2_2 | RNA_pol_Rpb2_2 | RNA_pol_Rpb2_1 | RNA_pol_Rpb2_3 | RNA_pol_Rpb2_45 |
| TC | Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057 | Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057_6 | 10766 | 11506 | - | 3.A.1.23.2 |
| pfam | Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057 | Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057_7 | 11503 | 12315 | - | CbiQ |
| TC | Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057 | Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057_8 | 12312 | 13316 | - | 3.A.1.23.5 |
| NULL(UNKNOWN) | Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057 | Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057_9 | 13461 | 14489 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057 | Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057_10 | 14453 | 15904 | - | Transglut_core |
| TC | Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057 | Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057_11 | 15904 | 16650 | - | 9.B.158.1.1 |
| peptidase | Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057 | Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057_12 | 16652 | 18088 | - | M17.UPW |
| TF | Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057 | Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057_13 | 18108 | 18869 | - | HTH_DeoR |
| CAZyme | Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057 | Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057_14 | 18958 | 20262 | - | GH29 |
| TC | Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057 | Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057_15 | 20300 | 21274 | - | 3.A.1.5.19 |
| TC | Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057 | Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057_16 | 21281 | 22264 | - | 3.A.1.5.2 |
| TC | Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057 | Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057_17 | 22273 | 23196 | - | 3.A.1.5.19 |
| TC | Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057 | Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057_18 | 23193 | 24137 | - | 3.A.1.5.19 |
| TC | Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057 | Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057_19 | 24251 | 25915 | - | 3.A.1.5.25 |
| pfam | Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057 | Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057_20 | 26339 | 26713 | - | Ribosomal_L12 | Ribosomal_L12_N |
| pfam | Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057 | Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057_21 | 26783 | 27283 | - | Ribosomal_L10 |
| CAZyme | Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057 | Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057_22 | 27773 | 29053 | + | GH18 |
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057_3
Type: CAZyme
Location: 1420 - 2718 (-)
Type: CAZyme
Location: 1420 - 2718 (-)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057_4
Type: pfam
Location: 2812 - 6525 (-)
Type: pfam
Location: 2812 - 6525 (-)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057_5
Type: pfam
Location: 6541 - 10383 (-)
Type: pfam
Location: 6541 - 10383 (-)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057_6
Type: TC
Location: 10766 - 11506 (-)
Type: TC
Location: 10766 - 11506 (-)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057_7
Type: pfam
Location: 11503 - 12315 (-)
Type: pfam
Location: 11503 - 12315 (-)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057_8
Type: TC
Location: 12312 - 13316 (-)
Type: TC
Location: 12312 - 13316 (-)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057_9
Type:
Location: 13461 - 14489 (-)
Type:
Location: 13461 - 14489 (-)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057_10
Type: pfam
Location: 14453 - 15904 (-)
Type: pfam
Location: 14453 - 15904 (-)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057_11
Type: TC
Location: 15904 - 16650 (-)
Type: TC
Location: 15904 - 16650 (-)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057_12
Type: peptidase
Location: 16652 - 18088 (-)
Type: peptidase
Location: 16652 - 18088 (-)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057_13
Type: TF
Location: 18108 - 18869 (-)
Type: TF
Location: 18108 - 18869 (-)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057_14
Type: CAZyme
Location: 18958 - 20262 (-)
Type: CAZyme
Location: 18958 - 20262 (-)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057_15
Type: TC
Location: 20300 - 21274 (-)
Type: TC
Location: 20300 - 21274 (-)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057_16
Type: TC
Location: 21281 - 22264 (-)
Type: TC
Location: 21281 - 22264 (-)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057_17
Type: TC
Location: 22273 - 23196 (-)
Type: TC
Location: 22273 - 23196 (-)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057_18
Type: TC
Location: 23193 - 24137 (-)
Type: TC
Location: 23193 - 24137 (-)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057_19
Type: TC
Location: 24251 - 25915 (-)
Type: TC
Location: 24251 - 25915 (-)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057_20
Type: pfam
Location: 26339 - 26713 (-)
Type: pfam
Location: 26339 - 26713 (-)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057_21
Type: pfam
Location: 26783 - 27283 (-)
Type: pfam
Location: 26783 - 27283 (-)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_15057_22
Type: CAZyme
Location: 27773 - 29053 (+)
Type: CAZyme
Location: 27773 - 29053 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Blautia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.