Cluster: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_1263 | Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_1263_7 | 6701 | 7921 | - | GT4 |
| pfam | Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_1263 | Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_1263_8 | 7918 | 9198 | - | PS_pyruv_trans |
| TC | Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_1263 | Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_1263_9 | 9231 | 10709 | - | 2.A.66.2.7 |
| TC | Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_1263 | Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_1263_10 | 10719 | 12113 | - | 9.B.18.1.1 |
| pfam | Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_1263 | Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_1263_11 | 12168 | 13538 | - | PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| pfam | Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_1263 | Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_1263_12 | 13646 | 15082 | - | NTP_transferase | MannoseP_isomer | Cupin_2 | NTP_transf_3 | ManC_GMP_beta-helix |
| CAZyme | Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_1263 | Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_1263_13 | 15079 | 16386 | - | GT4 |
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_1263_7
Type: CAZyme
Location: 6701 - 7921 (-)
Type: CAZyme
Location: 6701 - 7921 (-)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_1263_8
Type: pfam
Location: 7918 - 9198 (-)
Type: pfam
Location: 7918 - 9198 (-)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_1263_9
Type: TC
Location: 9231 - 10709 (-)
Type: TC
Location: 9231 - 10709 (-)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_1263_10
Type: TC
Location: 10719 - 12113 (-)
Type: TC
Location: 10719 - 12113 (-)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_1263_11
Type: pfam
Location: 12168 - 13538 (-)
Type: pfam
Location: 12168 - 13538 (-)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_1263_12
Type: pfam
Location: 13646 - 15082 (-)
Type: pfam
Location: 13646 - 15082 (-)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_1263_13
Type: CAZyme
Location: 15079 - 16386 (-)
Type: CAZyme
Location: 15079 - 16386 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Kosakonia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.