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Cluster: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_CGC61

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_8697 Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_8697_1 3 1043 - GH1
TC Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_8697 Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_8697_2 1064 2506 - 4.A.1.2.3
TF Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_8697 Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_8697_3 2770 3783 + LacI
TC Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_8697 Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_8697_4 3917 4462 + 5.A.3.3.1
TC Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_8697 Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_8697_5 4498 6648 + 3.D.1.9.2
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_8697_1
Type: CAZyme
Location: 3 - 1043 (-)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_8697_2
Type: TC
Location: 1064 - 2506 (-)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_8697_3
Type: TF
Location: 2770 - 3783 (+)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_8697_4
Type: TC
Location: 3917 - 4462 (+)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_8697_5
Type: TC
Location: 4498 - 6648 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_8697_4 vegetarian > omnivore 2.27749 0.04105

🧭 Explore Read Mapping of CGC

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