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Cluster: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_CGC51

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_7900 Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_7900_2 1074 1493 + 3.D.1.9.2
TC Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_7900 Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_7900_3 1542 3221 + 3.D.1.9.2
CAZyme Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_7900 Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_7900_4 3472 4554 + GH105
NULL(UNKNOWN) Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_7900 Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_7900_5 4583 7078 + NULL(UNKNOWN)
[View Structural Homologs]
TC Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_7900 Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_7900_6 7133 8479 + 2.A.1.14.7
TF Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_7900 Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_7900_7 8492 9553 - LacI
TC Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_7900 Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_7900_8 9721 11034 - 2.A.23.1.1
TC Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_7900 Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_7900_9 11720 13678 + 4.C.1.1.6
TC Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_7900 Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_7900_10 13886 14203 + 9.B.136.1.1
TC Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_7900 Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_7900_11 14200 15849 + 2.A.21.7.2
pfam Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_7900 Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_7900_12 15997 17304 + GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
TC Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_7900 Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_7900_13 17429 19075 - 2.A.36.3.1
TC Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_7900 Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_7900_14 19210 20559 - 2.A.40.7.5
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_7900_2
Type: TC
Location: 1074 - 1493 (+)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_7900_3
Type: TC
Location: 1542 - 3221 (+)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_7900_4
Type: CAZyme
Location: 3472 - 4554 (+)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_7900_5
Type:
Location: 4583 - 7078 (+)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_7900_6
Type: TC
Location: 7133 - 8479 (+)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_7900_7
Type: TF
Location: 8492 - 9553 (-)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_7900_8
Type: TC
Location: 9721 - 11034 (-)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_7900_9
Type: TC
Location: 11720 - 13678 (+)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_7900_10
Type: TC
Location: 13886 - 14203 (+)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_7900_11
Type: TC
Location: 14200 - 15849 (+)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_7900_12
Type: pfam
Location: 15997 - 17304 (+)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_7900_13
Type: TC
Location: 17429 - 19075 (-)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_7900_14
Type: TC
Location: 19210 - 20559 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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