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Cluster: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_6338 Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_6338_1 1 1149 + GT2
TC Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_6338 Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_6338_2 1217 3571 + 4.D.3.1.6
CAZyme Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_6338 Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_6338_3 3578 4684 + GH8
TC Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_6338 Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_6338_4 4666 8154 + 1.B.55.3.1
STP Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_6338 Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_6338_5 8407 10068 + EAL | GGDEF
TC Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_6338 Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_6338_6 10234 11520 + 2.A.23.1.7
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_6338_1
Type: CAZyme
Location: 1 - 1149 (+)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_6338_2
Type: TC
Location: 1217 - 3571 (+)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_6338_3
Type: CAZyme
Location: 3578 - 4684 (+)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_6338_4
Type: TC
Location: 4666 - 8154 (+)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_6338_5
Type: STP
Location: 8407 - 10068 (+)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_6338_6
Type: TC
Location: 10234 - 11520 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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