Cluster: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_CGC36
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1
- CGC Family ID: CGCFAM_00293
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_4890 | Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_4890_18 | 17785 | 20196 | - | 3.A.23.2.1 |
| TC | Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_4890 | Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_4890_19 | 20480 | 22510 | - | 2.A.15.1.4 |
| STP | Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_4890 | Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_4890_20 | 22750 | 23346 | + | TetR_N |
| sulfatase | Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_4890 | Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_4890_21 | 23360 | 24832 | + | S1_6 |
| CAZyme | Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_4890 | Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_4890_22 | 24859 | 26538 | + | AA3_2 |
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_4890_18
Type: TC
Location: 17785 - 20196 (-)
Type: TC
Location: 17785 - 20196 (-)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_4890_19
Type: TC
Location: 20480 - 22510 (-)
Type: TC
Location: 20480 - 22510 (-)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_4890_20
Type: STP
Location: 22750 - 23346 (+)
Type: STP
Location: 22750 - 23346 (+)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_4890_21
Type: sulfatase
Location: 23360 - 24832 (+)
Type: sulfatase
Location: 23360 - 24832 (+)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_4890_22
Type: CAZyme
Location: 24859 - 26538 (+)
Type: CAZyme
Location: 24859 - 26538 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Kosakonia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.