Cluster: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1
- CGC Family ID: CGCFAM_00626
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_2130 | Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_2130_11 | 9585 | 11057 | - | 2.A.39.3.4 |
| TF | Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_2130 | Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_2130_12 | 11204 | 11923 | + | GntR |
| pfam | Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_2130 | Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_2130_13 | 11920 | 12657 | + | Asp_Glu_race |
| CAZyme | Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_2130 | Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_2130_14 | 12688 | 13629 | + | CE4 |
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_2130_11
Type: TC
Location: 9585 - 11057 (-)
Type: TC
Location: 9585 - 11057 (-)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_2130_12
Type: TF
Location: 11204 - 11923 (+)
Type: TF
Location: 11204 - 11923 (+)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_2130_13
Type: pfam
Location: 11920 - 12657 (+)
Type: pfam
Location: 11920 - 12657 (+)
Gene ID: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_2130_14
Type: CAZyme
Location: 12688 - 13629 (+)
Type: CAZyme
Location: 12688 - 13629 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Kosakonia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.