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Cluster: BackhedF_2015_ERR526017_bin.6_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC BackhedF_2015_ERR526017_bin.6_k119_5913 BackhedF_2015_ERR526017_bin.6_k119_5913_3 1773 3455 + 2.A.66.4.4
pfam BackhedF_2015_ERR526017_bin.6_k119_5913 BackhedF_2015_ERR526017_bin.6_k119_5913_4 3462 5402 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC BackhedF_2015_ERR526017_bin.6_k119_5913 BackhedF_2015_ERR526017_bin.6_k119_5913_5 5766 7379 + 3.A.1.5.27
TC BackhedF_2015_ERR526017_bin.6_k119_5913 BackhedF_2015_ERR526017_bin.6_k119_5913_6 7537 8493 + 3.A.1.5.38
TC BackhedF_2015_ERR526017_bin.6_k119_5913 BackhedF_2015_ERR526017_bin.6_k119_5913_7 8497 10512 + 3.A.1.5.25
TC BackhedF_2015_ERR526017_bin.6_k119_5913 BackhedF_2015_ERR526017_bin.6_k119_5913_8 10513 11340 + 3.A.1.5.27
CAZyme BackhedF_2015_ERR526017_bin.6_k119_5913 BackhedF_2015_ERR526017_bin.6_k119_5913_9 11472 12398 + CE7
Gene ID: BackhedF_2015_ERR526017_bin.6_k119_5913_3
Type: TC
Location: 1773 - 3455 (+)
Gene ID: BackhedF_2015_ERR526017_bin.6_k119_5913_4
Type: pfam
Location: 3462 - 5402 (+)
Gene ID: BackhedF_2015_ERR526017_bin.6_k119_5913_5
Type: TC
Location: 5766 - 7379 (+)
Gene ID: BackhedF_2015_ERR526017_bin.6_k119_5913_6
Type: TC
Location: 7537 - 8493 (+)
Gene ID: BackhedF_2015_ERR526017_bin.6_k119_5913_7
Type: TC
Location: 8497 - 10512 (+)
Gene ID: BackhedF_2015_ERR526017_bin.6_k119_5913_8
Type: TC
Location: 10513 - 11340 (+)
Gene ID: BackhedF_2015_ERR526017_bin.6_k119_5913_9
Type: CAZyme
Location: 11472 - 12398 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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