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Cluster: BackhedF_2015_ERR526017_bin.6_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC BackhedF_2015_ERR526017_bin.6_k119_14155 BackhedF_2015_ERR526017_bin.6_k119_14155_6 5311 5649 - 4.A.3.1.2
TF BackhedF_2015_ERR526017_bin.6_k119_14155 BackhedF_2015_ERR526017_bin.6_k119_14155_7 5864 6868 - LacI
TC BackhedF_2015_ERR526017_bin.6_k119_14155 BackhedF_2015_ERR526017_bin.6_k119_14155_8 7226 9001 + 4.A.3.1.1
CAZyme BackhedF_2015_ERR526017_bin.6_k119_14155 BackhedF_2015_ERR526017_bin.6_k119_14155_9 9068 10507 + GH1
TF BackhedF_2015_ERR526017_bin.6_k119_14155 BackhedF_2015_ERR526017_bin.6_k119_14155_10 10785 11822 - LacI
CAZyme BackhedF_2015_ERR526017_bin.6_k119_14155 BackhedF_2015_ERR526017_bin.6_k119_14155_11 12164 13606 + GH1
TC BackhedF_2015_ERR526017_bin.6_k119_14155 BackhedF_2015_ERR526017_bin.6_k119_14155_12 13783 15543 + 4.A.3.1.1
TF BackhedF_2015_ERR526017_bin.6_k119_14155 BackhedF_2015_ERR526017_bin.6_k119_14155_13 15876 16877 - LacI
TC BackhedF_2015_ERR526017_bin.6_k119_14155 BackhedF_2015_ERR526017_bin.6_k119_14155_14 17161 18939 + 4.A.3.1.1
CAZyme BackhedF_2015_ERR526017_bin.6_k119_14155 BackhedF_2015_ERR526017_bin.6_k119_14155_15 19016 20437 + GH1
pfam BackhedF_2015_ERR526017_bin.6_k119_14155 BackhedF_2015_ERR526017_bin.6_k119_14155_16 20805 22037 + Fic
STP BackhedF_2015_ERR526017_bin.6_k119_14155 BackhedF_2015_ERR526017_bin.6_k119_14155_17 22143 22538 - DeoRC
TC BackhedF_2015_ERR526017_bin.6_k119_14155 BackhedF_2015_ERR526017_bin.6_k119_14155_18 22701 24395 - 4.A.3.1.1
Gene ID: BackhedF_2015_ERR526017_bin.6_k119_14155_6
Type: TC
Location: 5311 - 5649 (-)
Gene ID: BackhedF_2015_ERR526017_bin.6_k119_14155_7
Type: TF
Location: 5864 - 6868 (-)
Gene ID: BackhedF_2015_ERR526017_bin.6_k119_14155_8
Type: TC
Location: 7226 - 9001 (+)
Gene ID: BackhedF_2015_ERR526017_bin.6_k119_14155_9
Type: CAZyme
Location: 9068 - 10507 (+)
Gene ID: BackhedF_2015_ERR526017_bin.6_k119_14155_10
Type: TF
Location: 10785 - 11822 (-)
Gene ID: BackhedF_2015_ERR526017_bin.6_k119_14155_11
Type: CAZyme
Location: 12164 - 13606 (+)
Gene ID: BackhedF_2015_ERR526017_bin.6_k119_14155_12
Type: TC
Location: 13783 - 15543 (+)
Gene ID: BackhedF_2015_ERR526017_bin.6_k119_14155_13
Type: TF
Location: 15876 - 16877 (-)
Gene ID: BackhedF_2015_ERR526017_bin.6_k119_14155_14
Type: TC
Location: 17161 - 18939 (+)
Gene ID: BackhedF_2015_ERR526017_bin.6_k119_14155_15
Type: CAZyme
Location: 19016 - 20437 (+)
Gene ID: BackhedF_2015_ERR526017_bin.6_k119_14155_16
Type: pfam
Location: 20805 - 22037 (+)
Gene ID: BackhedF_2015_ERR526017_bin.6_k119_14155_17
Type: STP
Location: 22143 - 22538 (-)
Gene ID: BackhedF_2015_ERR526017_bin.6_k119_14155_18
Type: TC
Location: 22701 - 24395 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
BackhedF_2015_ERR526017_bin.6_k119_14155_10 vegetarian > omnivore 1.02438 0.02258

🧭 Explore Read Mapping of CGC

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