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Cluster: BackhedF_2015_ERR526017_bin.6_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme BackhedF_2015_ERR526017_bin.6_k119_11555 BackhedF_2015_ERR526017_bin.6_k119_11555_17 23386 26394 + GH2
NULL(UNKNOWN) BackhedF_2015_ERR526017_bin.6_k119_11555 BackhedF_2015_ERR526017_bin.6_k119_11555_18 26398 26853 + NULL(UNKNOWN)
[View Structural Homologs]
TC BackhedF_2015_ERR526017_bin.6_k119_11555 BackhedF_2015_ERR526017_bin.6_k119_11555_19 27007 28470 + 2.A.3.7.4
STP BackhedF_2015_ERR526017_bin.6_k119_11555 BackhedF_2015_ERR526017_bin.6_k119_11555_20 28893 29141 + PTS-HPr
STP BackhedF_2015_ERR526017_bin.6_k119_11555 BackhedF_2015_ERR526017_bin.6_k119_11555_21 29330 29572 + FeoA
TC BackhedF_2015_ERR526017_bin.6_k119_11555 BackhedF_2015_ERR526017_bin.6_k119_11555_22 29612 29833 + 9.A.8.1.6
TC BackhedF_2015_ERR526017_bin.6_k119_11555 BackhedF_2015_ERR526017_bin.6_k119_11555_23 29957 32284 + 9.A.8.1.6
Gene ID: BackhedF_2015_ERR526017_bin.6_k119_11555_17
Type: CAZyme
Location: 23386 - 26394 (+)
Gene ID: BackhedF_2015_ERR526017_bin.6_k119_11555_18
Type:
Location: 26398 - 26853 (+)
Gene ID: BackhedF_2015_ERR526017_bin.6_k119_11555_19
Type: TC
Location: 27007 - 28470 (+)
Gene ID: BackhedF_2015_ERR526017_bin.6_k119_11555_20
Type: STP
Location: 28893 - 29141 (+)
Gene ID: BackhedF_2015_ERR526017_bin.6_k119_11555_21
Type: STP
Location: 29330 - 29572 (+)
Gene ID: BackhedF_2015_ERR526017_bin.6_k119_11555_22
Type: TC
Location: 29612 - 29833 (+)
Gene ID: BackhedF_2015_ERR526017_bin.6_k119_11555_23
Type: TC
Location: 29957 - 32284 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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