Cluster: BackhedF_2015_ERR526017_bin.6_CGC10
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: BackhedF_2015_ERR526017_bin.6
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | BackhedF_2015_ERR526017_bin.6_k119_11254 | BackhedF_2015_ERR526017_bin.6_k119_11254_24 | 23307 | 24602 | - | GT2 |
| pfam | BackhedF_2015_ERR526017_bin.6_k119_11254 | BackhedF_2015_ERR526017_bin.6_k119_11254_25 | 24685 | 25698 | - | PseudoU_synth_2 | S4 |
| TC | BackhedF_2015_ERR526017_bin.6_k119_11254 | BackhedF_2015_ERR526017_bin.6_k119_11254_26 | 25698 | 26225 | - | 9.B.105.1.1 |
Gene ID: BackhedF_2015_ERR526017_bin.6_k119_11254_24
Type: CAZyme
Location: 23307 - 24602 (-)
Type: CAZyme
Location: 23307 - 24602 (-)
Gene ID: BackhedF_2015_ERR526017_bin.6_k119_11254_25
Type: pfam
Location: 24685 - 25698 (-)
Type: pfam
Location: 24685 - 25698 (-)
Gene ID: BackhedF_2015_ERR526017_bin.6_k119_11254_26
Type: TC
Location: 25698 - 26225 (-)
Type: TC
Location: 25698 - 26225 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900544995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.