Cluster: BackhedF_2015_ERR525972_bin.4_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: BackhedF_2015_ERR525972_bin.4
- CGC Family ID: CGCFAM_05008
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BackhedF_2015_ERR525972_bin.4_k119_14960 | BackhedF_2015_ERR525972_bin.4_k119_14960_11 | 9427 | 10836 | + | 2.A.1.3.51 |
| TC | BackhedF_2015_ERR525972_bin.4_k119_14960 | BackhedF_2015_ERR525972_bin.4_k119_14960_12 | 10970 | 12616 | + | 3.A.1.5.27 |
| pfam | BackhedF_2015_ERR525972_bin.4_k119_14960 | BackhedF_2015_ERR525972_bin.4_k119_14960_13 | 12683 | 13315 | + | PNPOx_N | PNP_phzG_C | Pyridox_oxase_2 |
| CAZyme | BackhedF_2015_ERR525972_bin.4_k119_14960 | BackhedF_2015_ERR525972_bin.4_k119_14960_14 | 13392 | 14495 | - | GH177 |
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_14960_11
Type: TC
Location: 9427 - 10836 (+)
Type: TC
Location: 9427 - 10836 (+)
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_14960_12
Type: TC
Location: 10970 - 12616 (+)
Type: TC
Location: 10970 - 12616 (+)
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_14960_13
Type: pfam
Location: 12683 - 13315 (+)
Type: pfam
Location: 12683 - 13315 (+)
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_14960_14
Type: CAZyme
Location: 13392 - 14495 (-)
Type: CAZyme
Location: 13392 - 14495 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| BackhedF_2015_ERR525972_bin.4_k119_14960_12 | vegan > omnivore | 1.11264 | 0.02173 |