Cluster: BackhedF_2015_ERR525972_bin.4_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: BackhedF_2015_ERR525972_bin.4
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | BackhedF_2015_ERR525972_bin.4_k119_9971 | BackhedF_2015_ERR525972_bin.4_k119_9971_3 | 2525 | 3577 | - | GT28 |
| TC | BackhedF_2015_ERR525972_bin.4_k119_9971 | BackhedF_2015_ERR525972_bin.4_k119_9971_4 | 3586 | 4770 | - | 2.A.103.1.1 |
| pfam | BackhedF_2015_ERR525972_bin.4_k119_9971 | BackhedF_2015_ERR525972_bin.4_k119_9971_5 | 4786 | 6099 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | BackhedF_2015_ERR525972_bin.4_k119_9971 | BackhedF_2015_ERR525972_bin.4_k119_9971_6 | 6162 | 7244 | - | 9.B.146.1.6 |
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_9971_3
Type: CAZyme
Location: 2525 - 3577 (-)
Type: CAZyme
Location: 2525 - 3577 (-)
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_9971_4
Type: TC
Location: 3586 - 4770 (-)
Type: TC
Location: 3586 - 4770 (-)
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_9971_5
Type: pfam
Location: 4786 - 6099 (-)
Type: pfam
Location: 4786 - 6099 (-)
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_9971_6
Type: TC
Location: 6162 - 7244 (-)
Type: TC
Location: 6162 - 7244 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| BackhedF_2015_ERR525972_bin.4_k119_9971_6 | vegetarian > vegan | 1.03870 | 0.01464 |