Cluster: BackhedF_2015_ERR525972_bin.4_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: BackhedF_2015_ERR525972_bin.4
- CGC Family ID: CGCFAM_00063
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BackhedF_2015_ERR525972_bin.4_k119_9114 | BackhedF_2015_ERR525972_bin.4_k119_9114_9 | 7749 | 8693 | + | 2.A.16.1.2 |
| TF | BackhedF_2015_ERR525972_bin.4_k119_9114 | BackhedF_2015_ERR525972_bin.4_k119_9114_10 | 8771 | 9484 | - | GntR |
| CAZyme | BackhedF_2015_ERR525972_bin.4_k119_9114 | BackhedF_2015_ERR525972_bin.4_k119_9114_11 | 9680 | 13453 | + | GH77 | GT35 |
| pfam | BackhedF_2015_ERR525972_bin.4_k119_9114 | BackhedF_2015_ERR525972_bin.4_k119_9114_12 | 13463 | 14254 | + | Exo_endo_phos |
| TC | BackhedF_2015_ERR525972_bin.4_k119_9114 | BackhedF_2015_ERR525972_bin.4_k119_9114_13 | 14265 | 15929 | + | 4.A.1.1.11 |
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_9114_9
Type: TC
Location: 7749 - 8693 (+)
Type: TC
Location: 7749 - 8693 (+)
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_9114_10
Type: TF
Location: 8771 - 9484 (-)
Type: TF
Location: 8771 - 9484 (-)
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_9114_11
Type: CAZyme
Location: 9680 - 13453 (+)
Type: CAZyme
Location: 9680 - 13453 (+)
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_9114_12
Type: pfam
Location: 13463 - 14254 (+)
Type: pfam
Location: 13463 - 14254 (+)
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_9114_13
Type: TC
Location: 14265 - 15929 (+)
Type: TC
Location: 14265 - 15929 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.