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Cluster: BackhedF_2015_ERR525972_bin.4_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC BackhedF_2015_ERR525972_bin.4_k119_8253 BackhedF_2015_ERR525972_bin.4_k119_8253_2 1033 2373 - 3.A.1.122.8
pfam BackhedF_2015_ERR525972_bin.4_k119_8253 BackhedF_2015_ERR525972_bin.4_k119_8253_3 2373 3767 - YHS | FtrD-like
TC BackhedF_2015_ERR525972_bin.4_k119_8253 BackhedF_2015_ERR525972_bin.4_k119_8253_4 3883 4404 - 2.A.108.2.10
TC BackhedF_2015_ERR525972_bin.4_k119_8253 BackhedF_2015_ERR525972_bin.4_k119_8253_5 4433 6337 - 2.A.108.2.10
CAZyme BackhedF_2015_ERR525972_bin.4_k119_8253 BackhedF_2015_ERR525972_bin.4_k119_8253_6 6556 8955 - GT51
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_8253_2
Type: TC
Location: 1033 - 2373 (-)
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_8253_3
Type: pfam
Location: 2373 - 3767 (-)
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_8253_4
Type: TC
Location: 3883 - 4404 (-)
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_8253_5
Type: TC
Location: 4433 - 6337 (-)
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_8253_6
Type: CAZyme
Location: 6556 - 8955 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
BackhedF_2015_ERR525972_bin.4_k119_8253_3 vegetarian > vegan 1.76277 0.01135
BackhedF_2015_ERR525972_bin.4_k119_8253_5 vegetarian > vegan 1.21456 0.01135

🧭 Explore Read Mapping of CGC

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