Cluster: BackhedF_2015_ERR525972_bin.4_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate: beta-glucan
- Genome ID: BackhedF_2015_ERR525972_bin.4
- CGC Family ID: CGCFAM_00107
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BackhedF_2015_ERR525972_bin.4_k119_5077 | BackhedF_2015_ERR525972_bin.4_k119_5077_1 | 359 | 1312 | - | 3.A.1.2.15 |
| TC | BackhedF_2015_ERR525972_bin.4_k119_5077 | BackhedF_2015_ERR525972_bin.4_k119_5077_2 | 1368 | 2879 | - | 3.A.1.2.20 |
| TC | BackhedF_2015_ERR525972_bin.4_k119_5077 | BackhedF_2015_ERR525972_bin.4_k119_5077_3 | 2940 | 3872 | - | 3.A.1.2.1 |
| TC | BackhedF_2015_ERR525972_bin.4_k119_5077 | BackhedF_2015_ERR525972_bin.4_k119_5077_4 | 3951 | 4889 | - | 3.A.1.2.14 |
| CAZyme | BackhedF_2015_ERR525972_bin.4_k119_5077 | BackhedF_2015_ERR525972_bin.4_k119_5077_5 | 5160 | 6299 | - | GH179 |
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_5077_1
Type: TC
Location: 359 - 1312 (-)
Type: TC
Location: 359 - 1312 (-)
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_5077_2
Type: TC
Location: 1368 - 2879 (-)
Type: TC
Location: 1368 - 2879 (-)
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_5077_3
Type: TC
Location: 2940 - 3872 (-)
Type: TC
Location: 2940 - 3872 (-)
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_5077_4
Type: TC
Location: 3951 - 4889 (-)
Type: TC
Location: 3951 - 4889 (-)
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_5077_5
Type: CAZyme
Location: 5160 - 6299 (-)
Type: CAZyme
Location: 5160 - 6299 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.