Cluster: BackhedF_2015_ERR525972_bin.4_CGC20
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: BackhedF_2015_ERR525972_bin.4
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | BackhedF_2015_ERR525972_bin.4_k119_33730 | BackhedF_2015_ERR525972_bin.4_k119_33730_4 | 2210 | 3379 | + | GT19 |
| pfam | BackhedF_2015_ERR525972_bin.4_k119_33730 | BackhedF_2015_ERR525972_bin.4_k119_33730_5 | 3372 | 3974 | + | RNase_HII |
| TC | BackhedF_2015_ERR525972_bin.4_k119_33730 | BackhedF_2015_ERR525972_bin.4_k119_33730_6 | 4010 | 5863 | + | 2.A.47.4.8 |
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_33730_4
Type: CAZyme
Location: 2210 - 3379 (+)
Type: CAZyme
Location: 2210 - 3379 (+)
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_33730_5
Type: pfam
Location: 3372 - 3974 (+)
Type: pfam
Location: 3372 - 3974 (+)
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_33730_6
Type: TC
Location: 4010 - 5863 (+)
Type: TC
Location: 4010 - 5863 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.