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Cluster: BackhedF_2015_ERR525972_bin.4_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme BackhedF_2015_ERR525972_bin.4_k119_32287 BackhedF_2015_ERR525972_bin.4_k119_32287_1 274 1401 + GH102
TC BackhedF_2015_ERR525972_bin.4_k119_32287 BackhedF_2015_ERR525972_bin.4_k119_32287_2 1401 2162 + 3.A.16.1.3
TC BackhedF_2015_ERR525972_bin.4_k119_32287 BackhedF_2015_ERR525972_bin.4_k119_32287_3 2331 3311 + 3.A.1.15.5
pfam BackhedF_2015_ERR525972_bin.4_k119_32287 BackhedF_2015_ERR525972_bin.4_k119_32287_4 3431 5566 + UPF0020 | THUMP | Cons_hypoth95 | Methyltrans_SAM | RlmL_1st
TC BackhedF_2015_ERR525972_bin.4_k119_32287 BackhedF_2015_ERR525972_bin.4_k119_32287_5 5602 7506 - 2.A.37.1.2
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_32287_1
Type: CAZyme
Location: 274 - 1401 (+)
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_32287_2
Type: TC
Location: 1401 - 2162 (+)
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_32287_3
Type: TC
Location: 2331 - 3311 (+)
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_32287_4
Type: pfam
Location: 3431 - 5566 (+)
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_32287_5
Type: TC
Location: 5602 - 7506 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
BackhedF_2015_ERR525972_bin.4_k119_32287_2 vegan > omnivore 1.41336 0.02173
BackhedF_2015_ERR525972_bin.4_k119_32287_2 vegetarian > omnivore 1.37994 0.00483
BackhedF_2015_ERR525972_bin.4_k119_32287_4 vegan > omnivore 1.23562 0.02173
BackhedF_2015_ERR525972_bin.4_k119_32287_4 vegetarian > omnivore 1.17910 0.00483

🧭 Explore Read Mapping of CGC

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