Cluster: BackhedF_2015_ERR525972_bin.4_CGC16
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: BackhedF_2015_ERR525972_bin.4
- CGC Family ID: CGCFAM_00036
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BackhedF_2015_ERR525972_bin.4_k119_26446 | BackhedF_2015_ERR525972_bin.4_k119_26446_9 | 6482 | 7792 | - | 9.B.18.1.2 |
| pfam | BackhedF_2015_ERR525972_bin.4_k119_26446 | BackhedF_2015_ERR525972_bin.4_k119_26446_10 | 7814 | 8914 | - | Amino_oxidase | GLF | NAD_binding_8 |
| TC | BackhedF_2015_ERR525972_bin.4_k119_26446 | BackhedF_2015_ERR525972_bin.4_k119_26446_11 | 8931 | 10397 | - | 2.A.66.2.16 |
| CAZyme | BackhedF_2015_ERR525972_bin.4_k119_26446 | BackhedF_2015_ERR525972_bin.4_k119_26446_12 | 10406 | 11464 | - | GT113 |
| CAZyme | BackhedF_2015_ERR525972_bin.4_k119_26446 | BackhedF_2015_ERR525972_bin.4_k119_26446_13 | 11487 | 12530 | - | GT2 |
| CAZyme | BackhedF_2015_ERR525972_bin.4_k119_26446 | BackhedF_2015_ERR525972_bin.4_k119_26446_14 | 12535 | 13602 | - | GT4 |
| CAZyme | BackhedF_2015_ERR525972_bin.4_k119_26446 | BackhedF_2015_ERR525972_bin.4_k119_26446_15 | 13617 | 14372 | - | GT111 |
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_26446_9
Type: TC
Location: 6482 - 7792 (-)
Type: TC
Location: 6482 - 7792 (-)
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_26446_10
Type: pfam
Location: 7814 - 8914 (-)
Type: pfam
Location: 7814 - 8914 (-)
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_26446_11
Type: TC
Location: 8931 - 10397 (-)
Type: TC
Location: 8931 - 10397 (-)
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_26446_12
Type: CAZyme
Location: 10406 - 11464 (-)
Type: CAZyme
Location: 10406 - 11464 (-)
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_26446_13
Type: CAZyme
Location: 11487 - 12530 (-)
Type: CAZyme
Location: 11487 - 12530 (-)
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_26446_14
Type: CAZyme
Location: 12535 - 13602 (-)
Type: CAZyme
Location: 12535 - 13602 (-)
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_26446_15
Type: CAZyme
Location: 13617 - 14372 (-)
Type: CAZyme
Location: 13617 - 14372 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.