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Cluster: BackhedF_2015_ERR525972_bin.4_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme BackhedF_2015_ERR525972_bin.4_k119_15997 BackhedF_2015_ERR525972_bin.4_k119_15997_11 12203 15229 - GH2
pfam BackhedF_2015_ERR525972_bin.4_k119_15997 BackhedF_2015_ERR525972_bin.4_k119_15997_12 15349 16548 - PMI_typeI_cat | MPI_cupin_dom
TC BackhedF_2015_ERR525972_bin.4_k119_15997 BackhedF_2015_ERR525972_bin.4_k119_15997_13 16621 17121 - 4.A.1.1.1
TC BackhedF_2015_ERR525972_bin.4_k119_15997 BackhedF_2015_ERR525972_bin.4_k119_15997_14 17181 18908 - 8.A.7.1.1
TC BackhedF_2015_ERR525972_bin.4_k119_15997 BackhedF_2015_ERR525972_bin.4_k119_15997_15 18988 19245 - 8.A.8.1.1
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_15997_11
Type: CAZyme
Location: 12203 - 15229 (-)
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_15997_12
Type: pfam
Location: 15349 - 16548 (-)
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_15997_13
Type: TC
Location: 16621 - 17121 (-)
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_15997_14
Type: TC
Location: 17181 - 18908 (-)
Gene ID: BackhedF_2015_ERR525972_bin.4_k119_15997_15
Type: TC
Location: 18988 - 19245 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
BackhedF_2015_ERR525972_bin.4_k119_15997_13 vegan > omnivore 3.63607 0.02173
BackhedF_2015_ERR525972_bin.4_k119_15997_13 vegetarian > omnivore 1.46917 0.00483

🧭 Explore Read Mapping of CGC

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