dbCAN Logo

Cluster: BackhedF_2015_ERR525949_bin.8_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme BackhedF_2015_ERR525949_bin.8_k119_6670 BackhedF_2015_ERR525949_bin.8_k119_6670_27 28513 29913 + GH1
TC BackhedF_2015_ERR525949_bin.8_k119_6670 BackhedF_2015_ERR525949_bin.8_k119_6670_28 30033 31376 + 4.A.3.2.9
TC BackhedF_2015_ERR525949_bin.8_k119_6670 BackhedF_2015_ERR525949_bin.8_k119_6670_29 31538 31840 + 4.A.3.2.9
TC BackhedF_2015_ERR525949_bin.8_k119_6670 BackhedF_2015_ERR525949_bin.8_k119_6670_30 31850 32182 + 4.A.3.2.3
STP BackhedF_2015_ERR525949_bin.8_k119_6670 BackhedF_2015_ERR525949_bin.8_k119_6670_31 32424 33377 + Glucokinase
pfam BackhedF_2015_ERR525949_bin.8_k119_6670 BackhedF_2015_ERR525949_bin.8_k119_6670_32 33544 34467 + DHH | DHHA2
TC BackhedF_2015_ERR525949_bin.8_k119_6670 BackhedF_2015_ERR525949_bin.8_k119_6670_33 34735 36093 + 2.A.33.1.1
Gene ID: BackhedF_2015_ERR525949_bin.8_k119_6670_27
Type: CAZyme
Location: 28513 - 29913 (+)
Gene ID: BackhedF_2015_ERR525949_bin.8_k119_6670_28
Type: TC
Location: 30033 - 31376 (+)
Gene ID: BackhedF_2015_ERR525949_bin.8_k119_6670_29
Type: TC
Location: 31538 - 31840 (+)
Gene ID: BackhedF_2015_ERR525949_bin.8_k119_6670_30
Type: TC
Location: 31850 - 32182 (+)
Gene ID: BackhedF_2015_ERR525949_bin.8_k119_6670_31
Type: STP
Location: 32424 - 33377 (+)
Gene ID: BackhedF_2015_ERR525949_bin.8_k119_6670_32
Type: pfam
Location: 33544 - 34467 (+)
Gene ID: BackhedF_2015_ERR525949_bin.8_k119_6670_33
Type: TC
Location: 34735 - 36093 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
BackhedF_2015_ERR525949_bin.8_k119_6670_29 vegan > omnivore 1.11034 0.00863

🧭 Explore Read Mapping of CGC

← Back to Cluster List