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Cluster: BackhedF_2015_ERR525949_bin.8_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC BackhedF_2015_ERR525949_bin.8_k119_5499 BackhedF_2015_ERR525949_bin.8_k119_5499_8 10346 10672 + 4.A.3.2.7
TC BackhedF_2015_ERR525949_bin.8_k119_5499 BackhedF_2015_ERR525949_bin.8_k119_5499_9 10719 11012 + 4.A.3.2.6
TC BackhedF_2015_ERR525949_bin.8_k119_5499 BackhedF_2015_ERR525949_bin.8_k119_5499_10 11022 12371 + 4.A.3.2.6
CAZyme BackhedF_2015_ERR525949_bin.8_k119_5499 BackhedF_2015_ERR525949_bin.8_k119_5499_11 12373 13827 + GH1
Gene ID: BackhedF_2015_ERR525949_bin.8_k119_5499_8
Type: TC
Location: 10346 - 10672 (+)
Gene ID: BackhedF_2015_ERR525949_bin.8_k119_5499_9
Type: TC
Location: 10719 - 11012 (+)
Gene ID: BackhedF_2015_ERR525949_bin.8_k119_5499_10
Type: TC
Location: 11022 - 12371 (+)
Gene ID: BackhedF_2015_ERR525949_bin.8_k119_5499_11
Type: CAZyme
Location: 12373 - 13827 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
BackhedF_2015_ERR525949_bin.8_k119_5499_8 vegetarian > vegan 1.35039 0.02517
BackhedF_2015_ERR525949_bin.8_k119_5499_9 vegetarian > vegan 2.08413 0.02517
BackhedF_2015_ERR525949_bin.8_k119_5499_10 vegetarian > vegan 1.82600 0.02517
BackhedF_2015_ERR525949_bin.8_k119_5499_11 vegetarian > vegan 2.14560 0.02517

🧭 Explore Read Mapping of CGC

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