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Cluster: BackhedF_2015_ERR525949_bin.8_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC BackhedF_2015_ERR525949_bin.8_k119_20301 BackhedF_2015_ERR525949_bin.8_k119_20301_3 2479 4806 - 9.A.8.1.6
TC BackhedF_2015_ERR525949_bin.8_k119_20301 BackhedF_2015_ERR525949_bin.8_k119_20301_4 4930 5151 - 9.A.8.1.6
STP BackhedF_2015_ERR525949_bin.8_k119_20301 BackhedF_2015_ERR525949_bin.8_k119_20301_5 5191 5433 - FeoA
STP BackhedF_2015_ERR525949_bin.8_k119_20301 BackhedF_2015_ERR525949_bin.8_k119_20301_6 5622 5870 - PTS-HPr
TC BackhedF_2015_ERR525949_bin.8_k119_20301 BackhedF_2015_ERR525949_bin.8_k119_20301_7 6292 7755 - 2.A.3.7.4
NULL(UNKNOWN) BackhedF_2015_ERR525949_bin.8_k119_20301 BackhedF_2015_ERR525949_bin.8_k119_20301_8 7909 8364 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme BackhedF_2015_ERR525949_bin.8_k119_20301 BackhedF_2015_ERR525949_bin.8_k119_20301_9 8368 11376 - GH2
Gene ID: BackhedF_2015_ERR525949_bin.8_k119_20301_3
Type: TC
Location: 2479 - 4806 (-)
Gene ID: BackhedF_2015_ERR525949_bin.8_k119_20301_4
Type: TC
Location: 4930 - 5151 (-)
Gene ID: BackhedF_2015_ERR525949_bin.8_k119_20301_5
Type: STP
Location: 5191 - 5433 (-)
Gene ID: BackhedF_2015_ERR525949_bin.8_k119_20301_6
Type: STP
Location: 5622 - 5870 (-)
Gene ID: BackhedF_2015_ERR525949_bin.8_k119_20301_7
Type: TC
Location: 6292 - 7755 (-)
Gene ID: BackhedF_2015_ERR525949_bin.8_k119_20301_8
Type:
Location: 7909 - 8364 (-)
Gene ID: BackhedF_2015_ERR525949_bin.8_k119_20301_9
Type: CAZyme
Location: 8368 - 11376 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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