Cluster: BackhedF_2015_ERR525938_bin.5_CGC7
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: BackhedF_2015_ERR525938_bin.5
- CGC Family ID: CGCFAM_01409
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BackhedF_2015_ERR525938_bin.5_k119_1192 | BackhedF_2015_ERR525938_bin.5_k119_1192_21 | 21059 | 22912 | - | 2.A.47.4.8 |
| pfam | BackhedF_2015_ERR525938_bin.5_k119_1192 | BackhedF_2015_ERR525938_bin.5_k119_1192_22 | 22948 | 23550 | - | RNase_HII |
| CAZyme | BackhedF_2015_ERR525938_bin.5_k119_1192 | BackhedF_2015_ERR525938_bin.5_k119_1192_23 | 23543 | 24712 | - | GT19 |
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_1192_21
Type: TC
Location: 21059 - 22912 (-)
Type: TC
Location: 21059 - 22912 (-)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_1192_22
Type: pfam
Location: 22948 - 23550 (-)
Type: pfam
Location: 22948 - 23550 (-)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_1192_23
Type: CAZyme
Location: 23543 - 24712 (-)
Type: CAZyme
Location: 23543 - 24712 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.