Cluster: BackhedF_2015_ERR525938_bin.5_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: BackhedF_2015_ERR525938_bin.5
- CGC Family ID: CGCFAM_05005
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BackhedF_2015_ERR525938_bin.5_k119_1024 | BackhedF_2015_ERR525938_bin.5_k119_1024_72 | 71073 | 72245 | - | 2.A.1.20.4 |
| pfam | BackhedF_2015_ERR525938_bin.5_k119_1024 | BackhedF_2015_ERR525938_bin.5_k119_1024_73 | 72317 | 72934 | - | Y_phosphatase | DSPc | Y_phosphatase2 | Y_phosphatase3 | PTP-NADK |
| CAZyme | BackhedF_2015_ERR525938_bin.5_k119_1024 | BackhedF_2015_ERR525938_bin.5_k119_1024_74 | 72944 | 74398 | - | GH32 |
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_1024_72
Type: TC
Location: 71073 - 72245 (-)
Type: TC
Location: 71073 - 72245 (-)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_1024_73
Type: pfam
Location: 72317 - 72934 (-)
Type: pfam
Location: 72317 - 72934 (-)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_1024_74
Type: CAZyme
Location: 72944 - 74398 (-)
Type: CAZyme
Location: 72944 - 74398 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.