dbCAN Logo

Cluster: BackhedF_2015_ERR525938_bin.5_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC BackhedF_2015_ERR525938_bin.5_k119_999 BackhedF_2015_ERR525938_bin.5_k119_999_206 205237 207087 + 3.A.18.1.1
CAZyme BackhedF_2015_ERR525938_bin.5_k119_999 BackhedF_2015_ERR525938_bin.5_k119_999_207 207183 208577 + GH23
NULL(UNKNOWN) BackhedF_2015_ERR525938_bin.5_k119_999 BackhedF_2015_ERR525938_bin.5_k119_999_208 208633 208776 + NULL(UNKNOWN)
[View Structural Homologs]
pfam BackhedF_2015_ERR525938_bin.5_k119_999 BackhedF_2015_ERR525938_bin.5_k119_999_209 208826 209149 - Ribosomal_S30AE
TC BackhedF_2015_ERR525938_bin.5_k119_999 BackhedF_2015_ERR525938_bin.5_k119_999_210 209391 210761 - 2.A.25.1.4
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_999_206
Type: TC
Location: 205237 - 207087 (+)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_999_207
Type: CAZyme
Location: 207183 - 208577 (+)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_999_208
Type:
Location: 208633 - 208776 (+)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_999_209
Type: pfam
Location: 208826 - 209149 (-)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_999_210
Type: TC
Location: 209391 - 210761 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
BackhedF_2015_ERR525938_bin.5_k119_999_207 vegetarian > omnivore 1.47216 0.01033
BackhedF_2015_ERR525938_bin.5_k119_999_208 vegan > omnivore 1.03641 0.00581
BackhedF_2015_ERR525938_bin.5_k119_999_208 vegetarian > omnivore 1.52226 0.01033

🧭 Explore Read Mapping of CGC

← Back to Cluster List