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Cluster: BackhedF_2015_ERR525938_bin.5_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC BackhedF_2015_ERR525938_bin.5_k119_999 BackhedF_2015_ERR525938_bin.5_k119_999_52 48275 49156 + 3.A.1.15.4
TC BackhedF_2015_ERR525938_bin.5_k119_999 BackhedF_2015_ERR525938_bin.5_k119_999_53 49156 50052 + 3.A.1.15.4
TC BackhedF_2015_ERR525938_bin.5_k119_999 BackhedF_2015_ERR525938_bin.5_k119_999_54 50056 50907 + 3.A.1.15.4
TC BackhedF_2015_ERR525938_bin.5_k119_999 BackhedF_2015_ERR525938_bin.5_k119_999_55 50900 51733 + 3.A.1.15.4
pfam BackhedF_2015_ERR525938_bin.5_k119_999 BackhedF_2015_ERR525938_bin.5_k119_999_56 51768 52940 - MTS | tRNA_U5-meth_tr | Methyltransf_31
CAZyme BackhedF_2015_ERR525938_bin.5_k119_999 BackhedF_2015_ERR525938_bin.5_k119_999_57 52937 53980 - GH3
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_999_52
Type: TC
Location: 48275 - 49156 (+)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_999_53
Type: TC
Location: 49156 - 50052 (+)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_999_54
Type: TC
Location: 50056 - 50907 (+)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_999_55
Type: TC
Location: 50900 - 51733 (+)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_999_56
Type: pfam
Location: 51768 - 52940 (-)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_999_57
Type: CAZyme
Location: 52937 - 53980 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
BackhedF_2015_ERR525938_bin.5_k119_999_54 vegan > omnivore 2.32833 0.00581
BackhedF_2015_ERR525938_bin.5_k119_999_54 vegetarian > omnivore 1.35073 0.01033
BackhedF_2015_ERR525938_bin.5_k119_999_55 vegan > omnivore 2.14088 0.00581
BackhedF_2015_ERR525938_bin.5_k119_999_55 vegetarian > omnivore 1.24637 0.01033

🧭 Explore Read Mapping of CGC

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