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Cluster: BackhedF_2015_ERR525938_bin.5_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC BackhedF_2015_ERR525938_bin.5_k119_3570 BackhedF_2015_ERR525938_bin.5_k119_3570_109 116207 117331 - 1.B.1.3.3
CAZyme BackhedF_2015_ERR525938_bin.5_k119_3570 BackhedF_2015_ERR525938_bin.5_k119_3570_110 117495 118448 - GT9
TC BackhedF_2015_ERR525938_bin.5_k119_3570 BackhedF_2015_ERR525938_bin.5_k119_3570_111 118445 119350 - 2.A.7.3.58
NULL(UNKNOWN) BackhedF_2015_ERR525938_bin.5_k119_3570 BackhedF_2015_ERR525938_bin.5_k119_3570_112 119380 119964 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme BackhedF_2015_ERR525938_bin.5_k119_3570 BackhedF_2015_ERR525938_bin.5_k119_3570_113 119982 121025 - GT9
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_3570_109
Type: TC
Location: 116207 - 117331 (-)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_3570_110
Type: CAZyme
Location: 117495 - 118448 (-)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_3570_111
Type: TC
Location: 118445 - 119350 (-)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_3570_112
Type:
Location: 119380 - 119964 (-)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_3570_113
Type: CAZyme
Location: 119982 - 121025 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
BackhedF_2015_ERR525938_bin.5_k119_3570_110 vegan > omnivore 1.04771 0.00581
BackhedF_2015_ERR525938_bin.5_k119_3570_110 vegetarian > omnivore 1.58783 0.01033

🧭 Explore Read Mapping of CGC

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