Cluster: BackhedF_2015_ERR525938_bin.5_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: BackhedF_2015_ERR525938_bin.5
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BackhedF_2015_ERR525938_bin.5_k119_870 | BackhedF_2015_ERR525938_bin.5_k119_870_36 | 34049 | 35131 | + | 9.B.146.1.6 |
| pfam | BackhedF_2015_ERR525938_bin.5_k119_870 | BackhedF_2015_ERR525938_bin.5_k119_870_37 | 35194 | 36507 | + | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | BackhedF_2015_ERR525938_bin.5_k119_870 | BackhedF_2015_ERR525938_bin.5_k119_870_38 | 36523 | 37707 | + | 2.A.103.1.1 |
| CAZyme | BackhedF_2015_ERR525938_bin.5_k119_870 | BackhedF_2015_ERR525938_bin.5_k119_870_39 | 37716 | 38768 | + | GT28 |
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_870_36
Type: TC
Location: 34049 - 35131 (+)
Type: TC
Location: 34049 - 35131 (+)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_870_37
Type: pfam
Location: 35194 - 36507 (+)
Type: pfam
Location: 35194 - 36507 (+)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_870_38
Type: TC
Location: 36523 - 37707 (+)
Type: TC
Location: 36523 - 37707 (+)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_870_39
Type: CAZyme
Location: 37716 - 38768 (+)
Type: CAZyme
Location: 37716 - 38768 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.