Cluster: BackhedF_2015_ERR525938_bin.5_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 3
- Substrate:
- Genome ID: BackhedF_2015_ERR525938_bin.5
- CGC Family ID: CGCFAM_06842
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | BackhedF_2015_ERR525938_bin.5_k119_3570 | BackhedF_2015_ERR525938_bin.5_k119_3570_2 | 322 | 1206 | - | GT2 |
| CAZyme | BackhedF_2015_ERR525938_bin.5_k119_3570 | BackhedF_2015_ERR525938_bin.5_k119_3570_3 | 1212 | 1964 | - | GT2 |
| TC | BackhedF_2015_ERR525938_bin.5_k119_3570 | BackhedF_2015_ERR525938_bin.5_k119_3570_4 | 1945 | 3162 | - | 2.A.66.2.13 |
| CAZyme | BackhedF_2015_ERR525938_bin.5_k119_3570 | BackhedF_2015_ERR525938_bin.5_k119_3570_5 | 3189 | 4100 | - | GT82 |
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_3570_2
Type: CAZyme
Location: 322 - 1206 (-)
Type: CAZyme
Location: 322 - 1206 (-)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_3570_3
Type: CAZyme
Location: 1212 - 1964 (-)
Type: CAZyme
Location: 1212 - 1964 (-)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_3570_4
Type: TC
Location: 1945 - 3162 (-)
Type: TC
Location: 1945 - 3162 (-)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_3570_5
Type: CAZyme
Location: 3189 - 4100 (-)
Type: CAZyme
Location: 3189 - 4100 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.