Cluster: BackhedF_2015_ERR525938_bin.5_CGC18
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate:
- Genome ID: BackhedF_2015_ERR525938_bin.5
- CGC Family ID: CGCFAM_01708
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BackhedF_2015_ERR525938_bin.5_k119_3023 | BackhedF_2015_ERR525938_bin.5_k119_3023_19 | 20026 | 20799 | - | 3.A.1.14.19 |
| TC | BackhedF_2015_ERR525938_bin.5_k119_3023 | BackhedF_2015_ERR525938_bin.5_k119_3023_20 | 20799 | 21848 | - | 3.A.1.14.5 |
| STP | BackhedF_2015_ERR525938_bin.5_k119_3023 | BackhedF_2015_ERR525938_bin.5_k119_3023_21 | 21864 | 22979 | - | Peripla_BP_2 |
| pfam | BackhedF_2015_ERR525938_bin.5_k119_3023 | BackhedF_2015_ERR525938_bin.5_k119_3023_22 | 23079 | 24218 | - | CCP_MauG |
| CAZyme | BackhedF_2015_ERR525938_bin.5_k119_3023 | BackhedF_2015_ERR525938_bin.5_k119_3023_23 | 24298 | 25413 | - | GH103 |
| CAZyme | BackhedF_2015_ERR525938_bin.5_k119_3023 | BackhedF_2015_ERR525938_bin.5_k119_3023_24 | 25447 | 26250 | - | GT2 |
| CAZyme | BackhedF_2015_ERR525938_bin.5_k119_3023 | BackhedF_2015_ERR525938_bin.5_k119_3023_25 | 26273 | 27154 | - | GT2 |
| NULL(UNKNOWN) | BackhedF_2015_ERR525938_bin.5_k119_3023 | BackhedF_2015_ERR525938_bin.5_k119_3023_26 | 27147 | 28346 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | BackhedF_2015_ERR525938_bin.5_k119_3023 | BackhedF_2015_ERR525938_bin.5_k119_3023_27 | 28354 | 29124 | - | GT25 |
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_3023_19
Type: TC
Location: 20026 - 20799 (-)
Type: TC
Location: 20026 - 20799 (-)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_3023_20
Type: TC
Location: 20799 - 21848 (-)
Type: TC
Location: 20799 - 21848 (-)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_3023_21
Type: STP
Location: 21864 - 22979 (-)
Type: STP
Location: 21864 - 22979 (-)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_3023_22
Type: pfam
Location: 23079 - 24218 (-)
Type: pfam
Location: 23079 - 24218 (-)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_3023_23
Type: CAZyme
Location: 24298 - 25413 (-)
Type: CAZyme
Location: 24298 - 25413 (-)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_3023_24
Type: CAZyme
Location: 25447 - 26250 (-)
Type: CAZyme
Location: 25447 - 26250 (-)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_3023_25
Type: CAZyme
Location: 26273 - 27154 (-)
Type: CAZyme
Location: 26273 - 27154 (-)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_3023_26
Type:
Location: 27147 - 28346 (-)
Type:
Location: 27147 - 28346 (-)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_3023_27
Type: CAZyme
Location: 28354 - 29124 (-)
Type: CAZyme
Location: 28354 - 29124 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| BackhedF_2015_ERR525938_bin.5_k119_3023_21 | vegan > omnivore | 1.60831 | 0.00581 |
| BackhedF_2015_ERR525938_bin.5_k119_3023_21 | vegetarian > omnivore | 1.03501 | 0.01033 |
| BackhedF_2015_ERR525938_bin.5_k119_3023_25 | vegetarian > omnivore | 2.06918 | 0.01033 |
| BackhedF_2015_ERR525938_bin.5_k119_3023_25 | vegetarian > vegan | 1.52793 | 0.03188 |