dbCAN Logo

Cluster: BackhedF_2015_ERR525938_bin.5_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme BackhedF_2015_ERR525938_bin.5_k119_2141 BackhedF_2015_ERR525938_bin.5_k119_2141_198 216896 219913 - GH2
pfam BackhedF_2015_ERR525938_bin.5_k119_2141 BackhedF_2015_ERR525938_bin.5_k119_2141_199 220035 221234 - PMI_typeI_cat | MPI_cupin_dom
TC BackhedF_2015_ERR525938_bin.5_k119_2141 BackhedF_2015_ERR525938_bin.5_k119_2141_200 221308 221808 - 4.A.1.1.1
TC BackhedF_2015_ERR525938_bin.5_k119_2141 BackhedF_2015_ERR525938_bin.5_k119_2141_201 221868 223595 - 8.A.7.1.1
TC BackhedF_2015_ERR525938_bin.5_k119_2141 BackhedF_2015_ERR525938_bin.5_k119_2141_202 223675 223932 - 8.A.8.1.1
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_2141_198
Type: CAZyme
Location: 216896 - 219913 (-)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_2141_199
Type: pfam
Location: 220035 - 221234 (-)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_2141_200
Type: TC
Location: 221308 - 221808 (-)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_2141_201
Type: TC
Location: 221868 - 223595 (-)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_2141_202
Type: TC
Location: 223675 - 223932 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
BackhedF_2015_ERR525938_bin.5_k119_2141_200 vegan > omnivore 2.74234 0.00581
BackhedF_2015_ERR525938_bin.5_k119_2141_200 vegetarian > omnivore 1.38042 0.01033

🧭 Explore Read Mapping of CGC

← Back to Cluster List