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Cluster: BackhedF_2015_ERR525938_bin.5_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC BackhedF_2015_ERR525938_bin.5_k119_2141 BackhedF_2015_ERR525938_bin.5_k119_2141_98 104340 106004 - 4.A.1.1.11
pfam BackhedF_2015_ERR525938_bin.5_k119_2141 BackhedF_2015_ERR525938_bin.5_k119_2141_99 106015 106806 - Exo_endo_phos
CAZyme BackhedF_2015_ERR525938_bin.5_k119_2141 BackhedF_2015_ERR525938_bin.5_k119_2141_100 106816 109083 - GT35
CAZyme BackhedF_2015_ERR525938_bin.5_k119_2141 BackhedF_2015_ERR525938_bin.5_k119_2141_101 109083 110588 - GH77
TF BackhedF_2015_ERR525938_bin.5_k119_2141 BackhedF_2015_ERR525938_bin.5_k119_2141_102 110784 111497 + GntR
TC BackhedF_2015_ERR525938_bin.5_k119_2141 BackhedF_2015_ERR525938_bin.5_k119_2141_103 111577 112521 - 2.A.16.1.2
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_2141_98
Type: TC
Location: 104340 - 106004 (-)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_2141_99
Type: pfam
Location: 106015 - 106806 (-)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_2141_100
Type: CAZyme
Location: 106816 - 109083 (-)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_2141_101
Type: CAZyme
Location: 109083 - 110588 (-)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_2141_102
Type: TF
Location: 110784 - 111497 (+)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_2141_103
Type: TC
Location: 111577 - 112521 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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