Cluster: BackhedF_2015_ERR525938_bin.5_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: BackhedF_2015_ERR525938_bin.5
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | BackhedF_2015_ERR525938_bin.5_k119_1680 | BackhedF_2015_ERR525938_bin.5_k119_1680_26 | 21514 | 22809 | - | GT30 |
| CAZyme | BackhedF_2015_ERR525938_bin.5_k119_1680 | BackhedF_2015_ERR525938_bin.5_k119_1680_27 | 22871 | 23629 | + | GT2 |
| TC | BackhedF_2015_ERR525938_bin.5_k119_1680 | BackhedF_2015_ERR525938_bin.5_k119_1680_28 | 23716 | 27498 | - | 1.B.40.2.4 |
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_1680_26
Type: CAZyme
Location: 21514 - 22809 (-)
Type: CAZyme
Location: 21514 - 22809 (-)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_1680_27
Type: CAZyme
Location: 22871 - 23629 (+)
Type: CAZyme
Location: 22871 - 23629 (+)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_1680_28
Type: TC
Location: 23716 - 27498 (-)
Type: TC
Location: 23716 - 27498 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.