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Cluster: BackhedF_2015_ERR525938_bin.5_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme BackhedF_2015_ERR525938_bin.5_k119_1192 BackhedF_2015_ERR525938_bin.5_k119_1192_212 217744 218772 + GT9
TC BackhedF_2015_ERR525938_bin.5_k119_1192 BackhedF_2015_ERR525938_bin.5_k119_1192_213 218722 219387 - 2.A.115.2.7
pfam BackhedF_2015_ERR525938_bin.5_k119_1192 BackhedF_2015_ERR525938_bin.5_k119_1192_214 219581 221122 + PFL-like | YjjI-like
TC BackhedF_2015_ERR525938_bin.5_k119_1192 BackhedF_2015_ERR525938_bin.5_k119_1192_215 221165 223030 - 2.A.16.2.2
TC BackhedF_2015_ERR525938_bin.5_k119_1192 BackhedF_2015_ERR525938_bin.5_k119_1192_216 223030 223335 - 9.B.21.2.1
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_1192_212
Type: CAZyme
Location: 217744 - 218772 (+)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_1192_213
Type: TC
Location: 218722 - 219387 (-)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_1192_214
Type: pfam
Location: 219581 - 221122 (+)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_1192_215
Type: TC
Location: 221165 - 223030 (-)
Gene ID: BackhedF_2015_ERR525938_bin.5_k119_1192_216
Type: TC
Location: 223030 - 223335 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
BackhedF_2015_ERR525938_bin.5_k119_1192_212 vegan > omnivore 1.45308 0.00581
BackhedF_2015_ERR525938_bin.5_k119_1192_212 vegetarian > omnivore 1.15320 0.01033
BackhedF_2015_ERR525938_bin.5_k119_1192_213 vegan > omnivore 1.18023 0.00581
BackhedF_2015_ERR525938_bin.5_k119_1192_213 vegetarian > omnivore 1.28491 0.00711

🧭 Explore Read Mapping of CGC

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