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Cluster: BackhedF_2015_ERR525908_bin.3_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme BackhedF_2015_ERR525908_bin.3_k119_8675 BackhedF_2015_ERR525908_bin.3_k119_8675_63 69269 72277 + GH2
NULL(UNKNOWN) BackhedF_2015_ERR525908_bin.3_k119_8675 BackhedF_2015_ERR525908_bin.3_k119_8675_64 72281 72736 + NULL(UNKNOWN)
[View Structural Homologs]
TC BackhedF_2015_ERR525908_bin.3_k119_8675 BackhedF_2015_ERR525908_bin.3_k119_8675_65 72890 74353 + 2.A.3.7.4
STP BackhedF_2015_ERR525908_bin.3_k119_8675 BackhedF_2015_ERR525908_bin.3_k119_8675_66 74775 75023 + PTS-HPr
STP BackhedF_2015_ERR525908_bin.3_k119_8675 BackhedF_2015_ERR525908_bin.3_k119_8675_67 75212 75454 + FeoA
TC BackhedF_2015_ERR525908_bin.3_k119_8675 BackhedF_2015_ERR525908_bin.3_k119_8675_68 75494 75715 + 9.A.8.1.6
TC BackhedF_2015_ERR525908_bin.3_k119_8675 BackhedF_2015_ERR525908_bin.3_k119_8675_69 75839 78166 + 9.A.8.1.6
Gene ID: BackhedF_2015_ERR525908_bin.3_k119_8675_63
Type: CAZyme
Location: 69269 - 72277 (+)
Gene ID: BackhedF_2015_ERR525908_bin.3_k119_8675_64
Type:
Location: 72281 - 72736 (+)
Gene ID: BackhedF_2015_ERR525908_bin.3_k119_8675_65
Type: TC
Location: 72890 - 74353 (+)
Gene ID: BackhedF_2015_ERR525908_bin.3_k119_8675_66
Type: STP
Location: 74775 - 75023 (+)
Gene ID: BackhedF_2015_ERR525908_bin.3_k119_8675_67
Type: STP
Location: 75212 - 75454 (+)
Gene ID: BackhedF_2015_ERR525908_bin.3_k119_8675_68
Type: TC
Location: 75494 - 75715 (+)
Gene ID: BackhedF_2015_ERR525908_bin.3_k119_8675_69
Type: TC
Location: 75839 - 78166 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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