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Cluster: BackhedF_2015_ERR525908_bin.3_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC BackhedF_2015_ERR525908_bin.3_k119_6050 BackhedF_2015_ERR525908_bin.3_k119_6050_10 13749 15431 + 2.A.66.4.4
pfam BackhedF_2015_ERR525908_bin.3_k119_6050 BackhedF_2015_ERR525908_bin.3_k119_6050_11 15438 17378 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC BackhedF_2015_ERR525908_bin.3_k119_6050 BackhedF_2015_ERR525908_bin.3_k119_6050_12 17744 19357 + 3.A.1.5.27
TC BackhedF_2015_ERR525908_bin.3_k119_6050 BackhedF_2015_ERR525908_bin.3_k119_6050_13 19513 20469 + 3.A.1.5.38
TC BackhedF_2015_ERR525908_bin.3_k119_6050 BackhedF_2015_ERR525908_bin.3_k119_6050_14 20473 22488 + 3.A.1.5.25
TC BackhedF_2015_ERR525908_bin.3_k119_6050 BackhedF_2015_ERR525908_bin.3_k119_6050_15 22489 23316 + 3.A.1.5.27
CAZyme BackhedF_2015_ERR525908_bin.3_k119_6050 BackhedF_2015_ERR525908_bin.3_k119_6050_16 23448 24374 + CE7
Gene ID: BackhedF_2015_ERR525908_bin.3_k119_6050_10
Type: TC
Location: 13749 - 15431 (+)
Gene ID: BackhedF_2015_ERR525908_bin.3_k119_6050_11
Type: pfam
Location: 15438 - 17378 (+)
Gene ID: BackhedF_2015_ERR525908_bin.3_k119_6050_12
Type: TC
Location: 17744 - 19357 (+)
Gene ID: BackhedF_2015_ERR525908_bin.3_k119_6050_13
Type: TC
Location: 19513 - 20469 (+)
Gene ID: BackhedF_2015_ERR525908_bin.3_k119_6050_14
Type: TC
Location: 20473 - 22488 (+)
Gene ID: BackhedF_2015_ERR525908_bin.3_k119_6050_15
Type: TC
Location: 22489 - 23316 (+)
Gene ID: BackhedF_2015_ERR525908_bin.3_k119_6050_16
Type: CAZyme
Location: 23448 - 24374 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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