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Cluster: BackhedF_2015_ERR525908_bin.3_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC BackhedF_2015_ERR525908_bin.3_k119_17648 BackhedF_2015_ERR525908_bin.3_k119_17648_2 1159 1824 + 9.B.18.1.2
CAZyme BackhedF_2015_ERR525908_bin.3_k119_17648 BackhedF_2015_ERR525908_bin.3_k119_17648_3 1825 2658 + GT2
CAZyme BackhedF_2015_ERR525908_bin.3_k119_17648 BackhedF_2015_ERR525908_bin.3_k119_17648_4 2663 3655 + GT2
pfam BackhedF_2015_ERR525908_bin.3_k119_17648 BackhedF_2015_ERR525908_bin.3_k119_17648_5 3851 4966 + EpsG
CAZyme BackhedF_2015_ERR525908_bin.3_k119_17648 BackhedF_2015_ERR525908_bin.3_k119_17648_6 4959 5954 + GT2
CAZyme BackhedF_2015_ERR525908_bin.3_k119_17648 BackhedF_2015_ERR525908_bin.3_k119_17648_7 6342 7376 + GT2
Gene ID: BackhedF_2015_ERR525908_bin.3_k119_17648_2
Type: TC
Location: 1159 - 1824 (+)
Gene ID: BackhedF_2015_ERR525908_bin.3_k119_17648_3
Type: CAZyme
Location: 1825 - 2658 (+)
Gene ID: BackhedF_2015_ERR525908_bin.3_k119_17648_4
Type: CAZyme
Location: 2663 - 3655 (+)
Gene ID: BackhedF_2015_ERR525908_bin.3_k119_17648_5
Type: pfam
Location: 3851 - 4966 (+)
Gene ID: BackhedF_2015_ERR525908_bin.3_k119_17648_6
Type: CAZyme
Location: 4959 - 5954 (+)
Gene ID: BackhedF_2015_ERR525908_bin.3_k119_17648_7
Type: CAZyme
Location: 6342 - 7376 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
BackhedF_2015_ERR525908_bin.3_k119_17648_2 vegan > omnivore 1.01595 0.01332

🧭 Explore Read Mapping of CGC

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