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Cluster: BackhedF_2015_ERR525865_bin.8_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC BackhedF_2015_ERR525865_bin.8_k119_9270 BackhedF_2015_ERR525865_bin.8_k119_9270_16 19935 20408 + 4.A.6.1.18
TC BackhedF_2015_ERR525865_bin.8_k119_9270 BackhedF_2015_ERR525865_bin.8_k119_9270_17 20549 21202 + 4.A.6.1.13
TC BackhedF_2015_ERR525865_bin.8_k119_9270 BackhedF_2015_ERR525865_bin.8_k119_9270_18 21205 22038 + 4.A.6.1.13
pfam BackhedF_2015_ERR525865_bin.8_k119_9270 BackhedF_2015_ERR525865_bin.8_k119_9270_19 22065 22463 + EIIA-man
CAZyme BackhedF_2015_ERR525865_bin.8_k119_9270 BackhedF_2015_ERR525865_bin.8_k119_9270_20 22476 23600 + GH172
Gene ID: BackhedF_2015_ERR525865_bin.8_k119_9270_16
Type: TC
Location: 19935 - 20408 (+)
Gene ID: BackhedF_2015_ERR525865_bin.8_k119_9270_17
Type: TC
Location: 20549 - 21202 (+)
Gene ID: BackhedF_2015_ERR525865_bin.8_k119_9270_18
Type: TC
Location: 21205 - 22038 (+)
Gene ID: BackhedF_2015_ERR525865_bin.8_k119_9270_19
Type: pfam
Location: 22065 - 22463 (+)
Gene ID: BackhedF_2015_ERR525865_bin.8_k119_9270_20
Type: CAZyme
Location: 22476 - 23600 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
BackhedF_2015_ERR525865_bin.8_k119_9270_16 vegan > omnivore 1.05654 0.00701

🧭 Explore Read Mapping of CGC

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